Tech Resources

Brain and Fiber Track Visualization

• AFNI

• Julich Brain Atlas

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MRI Viewers

• FSL
• Mango
• MRIcron

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• Neuroimaging Software: Artifacts, Functional Connectivity, ROIs

• Neuromap for Brain Map Comparison

• Nipype

• NITRC: Neuroimaging Tools and Resources Collaboratory

• PyCortex

• PySurfer

• SPM 12

• TrackVis

Neuroimaging and Electrophysiology

various comp neuro / MEEG / LFP short courses and summer schools maintained by @nschawor on X

Automagic’s No Programing Preprocessing EEG dataset

BrainStorm

BrainVision

EEGuana

Elephant Python Package

FieldTrip

Letswave7

MNE: EEG & MEG

Nilearn: GLM fMRI

Rave : No Programming

Neural Ensemble Tools

Neo Python Package

Nutmeg

SPM

Wonambi

Experimental Software

• OpenSesame
• PsychoPy
• Psytoolkit
• Labvanced
• Google SketchUp

Generic MindMap

ARIADNE Miro Eraser

Classroom Focused

ClassroomScreen

Build Games and Animations

• Coding Game
• Scratch

Data Visualization

• Floursih Studio
• CrowdSignal
• DataMapPlots (Litmap alternative)
• Sketch.Metademolab

Tractography and Neuroimaging Dataset

ABCD BIDS OpenNeuro

Typesetting

• LaTeX
• Pandoc
• Marpit

Scientific and Math Diagrams

• Chemix
• Desmos
• Piratefsh Github

Programming

• Python
• Scientific Python
• Programming for Linguistics

Notebooks

• Notebooks